BioMCP: Biomedical Model Context Protocol
Active
BioMCP is an open source (MIT License) toolkit that empowers AI assistants and agents with specialized biomedical knowledge. Built following the Model Context Protocol (MCP), it connects AI systems to authoritative biomedical data sources, enabling them to answer questions about clinical trials, scientific literature, and genomic variants with precision and depth.
Updated 8/8/2025
Key Features
What makes this MCP server special
Providing structured access to clinical trials
biomedical literature
and genomic variants
Enabling natural language queries to specialized databases without requiring knowledge of their specific syntax
Supporting biomedical research workflows through a consistent interface
Functioning as an MCP server for AI assistants and agents
Requirements
uv
Server Information
Status
Active
Version
1.0.0
License
MIT
Author
https://github.com/genomoncology
Installation Guide
Get started with this MCP server in minutes
1. Install the Package
-
2. Configuration
{
"mcpServers": {
"biomcp": {
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}
3. Usage Example
-